Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
U27_00112 | U27_02114 | Hypothetical protein. | Conserved crenarchaeal protein, putative. | 0.651 |
U27_00112 | U27_02139 | Hypothetical protein. | Hypothetical protein. | 0.697 |
U27_00112 | U27_03035 | Hypothetical protein. | Hypothetical protein. | 0.722 |
U27_00112 | U27_04413 | Hypothetical protein. | Hypothetical protein. | 0.676 |
U27_00112 | U27_05951 | Hypothetical protein. | Hypothetical protein. | 0.445 |
U27_00688 | U27_02139 | HNH endonuclease domain protein. | Hypothetical protein. | 0.700 |
U27_00688 | U27_02519 | HNH endonuclease domain protein. | Hypothetical protein. | 0.675 |
U27_00688 | U27_03035 | HNH endonuclease domain protein. | Hypothetical protein. | 0.687 |
U27_00688 | U27_04968 | HNH endonuclease domain protein. | Hypothetical protein. | 0.738 |
U27_00688 | U27_04969 | HNH endonuclease domain protein. | Hypothetical protein. | 0.739 |
U27_00688 | U27_05951 | HNH endonuclease domain protein. | Hypothetical protein. | 0.738 |
U27_02114 | U27_00112 | Conserved crenarchaeal protein, putative. | Hypothetical protein. | 0.651 |
U27_02114 | U27_02139 | Conserved crenarchaeal protein, putative. | Hypothetical protein. | 0.586 |
U27_02114 | U27_03035 | Conserved crenarchaeal protein, putative. | Hypothetical protein. | 0.676 |
U27_02139 | U27_00112 | Hypothetical protein. | Hypothetical protein. | 0.697 |
U27_02139 | U27_00688 | Hypothetical protein. | HNH endonuclease domain protein. | 0.700 |
U27_02139 | U27_02114 | Hypothetical protein. | Conserved crenarchaeal protein, putative. | 0.586 |
U27_02139 | U27_02519 | Hypothetical protein. | Hypothetical protein. | 0.510 |
U27_02139 | U27_03035 | Hypothetical protein. | Hypothetical protein. | 0.775 |
U27_02139 | U27_04413 | Hypothetical protein. | Hypothetical protein. | 0.596 |
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