STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_03148Transglycosylase associated protein. (116 aa)    
Predicted Functional Partners:
U27_03147
Radical SAM domain protein.
       0.723
U27_03169
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
 
    0.678
U27_02296
Protein serine phosphatase with GAF(S) sensor(S).
   
  
 0.592
U27_06433
Protein serine/threonine phosphatase.
   
  
 0.571
U27_04493
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein.
  
  
 0.483
U27_05749
Hypothetical protein.
  
  
 0.483
U27_03596
Membrane spanning protein ribonuclease BN-like family.
  
    0.471
U27_00365
Mg2 transporter protein CorA family protein.
  
  
 0.434
corA
Magnesium transport protein; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
  
  
 0.434
U27_00737
Hypothetical protein.
  
    0.430
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.