STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_03196Hypothetical protein. (125 aa)    
Predicted Functional Partners:
U27_04627
Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 0.979
U27_06662
Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 0.979
U27_02052
ABC transporter related protein.
  
 0.976
U27_02517
Fe(III) dicitrate ABC transporter, ATP-binding protein.
  
 0.976
U27_06661
ABC transporter related.
  
 0.976
U27_04338
phosphoribosyl-ATP diphosphatase; Belongs to the HisA/HisF family.
   
   0.892
U27_02386
Macrolide export ATP-binding/permease protein MacB; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
  
  
 0.597
U27_00185
Binding-protein-dependent transport systems inner membrane component.
   
  
 0.573
U27_00318
Maltooligosaccharide ABC transporter, permease component.
   
  
 0.573
U27_00618
ABC transporter, membrane spanning protein (Iron).
   
  
 0.573
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
Server load: low (30%) [HD]