STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_03233Sporulation related. (285 aa)    
Predicted Functional Partners:
U27_01107
FolC bifunctional protein; Belongs to the folylpolyglutamate synthase family.
  
  
 0.710
U27_00104
N-acetylmuramoyl-L-alanine amidase.
    
 0.653
U27_01801
Glycoside hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
     
 0.604
U27_01751
Cell wall hydrolase/autolysin.
    
 0.591
U27_02333
Glycosyl hydrolase, family 3.
    
 0.587
U27_02346
Glycoside hydrolase family 3 domain protein.
    
 0.587
U27_06247
Hypothetical protein.
    
  0.585
U27_06834
ABC transporter.
   
  
 0.569
U27_03387
JamP protein.
    
 0.559
U27_06565
Hypothetical protein.
    
  0.554
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.