STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_03664ABC transporter related. (228 aa)    
Predicted Functional Partners:
U27_03143
Putative macrolipide-specific ABC-type efflux carrier, MacA conjunction protein.
 0.998
U27_03665
ABC-type lipoprotein release transporter, permease component.
 
 0.998
U27_06029
Putative ABC transporter ATP-binding protein.
 0.998
U27_02470
Efflux ABC transporter, permease protein.
 
 0.992
U27_03472
Putative ABC transporter ATP-binding protein.
 0.992
U27_00668
Hypothetical protein.
 
 0.988
U27_02471
ABC-type transport system involved in lipoprotein release permease component.
 
 0.988
U27_00667
Lipoprotein releasing system transmembrane protein.
 
 0.985
U27_03666
Hypothetical protein.
 
 
 
 0.983
U27_04942
Lipoprotein releasing system, transmembrane protein, LolC/E family.
 0.980
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.