STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_03931Oxidoreductase domain protein. (338 aa)    
Predicted Functional Partners:
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 0.908
U27_04242
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
  
 0.908
U27_01629
Myo-inositol catabolism IolB domain protein.
 
  
 0.844
U27_01630
Thiamine pyrophosphate protein central region; Belongs to the TPP enzyme family.
 
  
 0.842
U27_03602
Hypothetical protein.
  
     0.774
U27_03891
Oxidoreductase domain protein.
  
     0.774
U27_05132
Probable NADH-dependent dehydrogenase related protein.
  
     0.771
U27_01340
Pleiotrophic regulatory protein DegT; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.769
U27_04516
Xylose isomerase domain protein TIM barrel.
 
 
 0.766
U27_06827
L-alanine:N-amidino-3-keto-scyllo-inosamine aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.753
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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