STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_03944Hypothetical protein. (89 aa)    
Predicted Functional Partners:
U27_05375
Hypothetical protein.
 
     0.777
U27_03943
Hypothetical protein.
       0.773
U27_00717
Hypothetical protein.
  
     0.689
U27_05324
Hypothetical protein.
  
     0.579
U27_06889
Hypothetical protein.
  
     0.531
U27_00393
Phosphate acetyltransferase.
  
     0.507
U27_05453
Hypothetical protein.
  
     0.500
U27_03722
Hypothetical protein.
  
     0.471
U27_04923
YcfA family protein.
  
     0.459
U27_03945
ATPase associated with various cellular activities, AAA_5.
       0.447
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.