STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_04107Serine acetyltransferase-like protein. (211 aa)    
Predicted Functional Partners:
U27_04108
Undecaprenyl-phosphate galactose phosphotransferase.
     0.989
U27_04106
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.968
U27_06153
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 0.964
U27_05403
TPR repeat protein.
   
   0.875
U27_01673
Thioredoxin.
    
   0.868
U27_04192
Thioredoxin; Belongs to the thioredoxin family.
    
   0.868
U27_04777
Thioredoxin.
    
   0.868
U27_00643
General stress protein.
    
   0.867
U27_04109
Glycosyl transferase group 1.
 
     0.832
U27_05221
UDP-N-acetylglucosamine 2-epimerase.
  
  0.824
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.