STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_04240Basic membrane lipoprotein. (332 aa)    
Predicted Functional Partners:
U27_04239
ABC transporter related.
 
 0.973
U27_04237
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.962
U27_04238
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.960
U27_00272
ABC transporter related.
 
 0.941
U27_06775
ABC transporter related.
 
 0.937
U27_00270
Sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.935
U27_06777
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.934
U27_04506
Sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.933
U27_06537
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.933
U27_00271
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.931
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.