STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_04255Extracellular solute-binding protein family 1. (424 aa)    
Predicted Functional Partners:
U27_04254
Putative sugar ABC transporter permease.
 
   0.956
U27_04253
Binding-protein-dependent transport systems inner membrane component.
 
   0.950
U27_03508
Putative sugar ABC transporter permease.
  
   0.863
U27_03509
Putative sugar ABC transporter permease.
  
   0.855
U27_03123
Binding-protein-dependent transport systems inner membrane component.
  
   0.837
U27_01940
ABC-type sugar/spermidine/putrescine/iron/ thiamine transport system, ATPase component; Belongs to the ABC transporter superfamily.
  
 0.794
U27_02366
SN-glycerol-3-phosphate ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.794
U27_02677
Transporter; Belongs to the ABC transporter superfamily.
  
 0.794
U27_04765
Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.794
U27_06517
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.794
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.