STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_04347Putative ABC-type sugar transport system, periplasmic component. (493 aa)    
Predicted Functional Partners:
U27_04349
Binding-protein-dependent transport systems inner membrane component.
 
   0.908
U27_05715
Hypothetical protein.
  
   0.880
U27_00830
Binding-protein-dependent transport systems inner membrane component.
  
   0.873
U27_06931
Binding-protein-dependent transport systems inner membrane component.
  
   0.872
U27_07094
Binding-protein-dependent transport systems inner membrane component.
  
   0.868
U27_06517
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.858
U27_06518
ABC transporter related; Belongs to the ABC transporter superfamily.
 
 0.856
U27_05719
Binding-protein-dependent transport systems inner membrane component.
  
   0.841
U27_06515
ABC transporter, permease protein.
  
   0.837
U27_04132
Putative transmembrane component of ABC transporter.
  
   0.836
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.