STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_04488Sodium-translocating NADH-quinone reductase subunit C. (246 aa)    
Predicted Functional Partners:
U27_04489
RnfA-Nqr electron transport subunit; Belongs to the NqrDE/RnfAE family.
 
 
 0.998
U27_04490
RnfA-Nqr electron transport subunit; Belongs to the NqrDE/RnfAE family.
 
 
 0.996
U27_04491
Oxidoreductase FAD/NAD(P)-binding domain protein.
 
 
 0.990
U27_04487
Sodium-translocating NADH-quinone reductase subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
 
   
 0.938
rnfA
Electron transport complex, RnfABCDGE type, A subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
   
 0.757
U27_04486
Hypothetical protein.
       0.697
U27_05619
Electron transport complex, RnfABCDGE type, E subunit; Belongs to the NqrDE/RnfAE family.
  
   
 0.687
U27_03604
Putative glycolate oxidase, subunit GlcD.
   
    0.580
U27_03901
CoB--CoM heterodisulfide reductase.
   
    0.580
rnfD
Electron transport complex, RnfABCDGE type, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
 
   
 0.532
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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