STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_04528Binding-protein-dependent transport systems inner membrane component. (285 aa)    
Predicted Functional Partners:
U27_06558
Binding-protein-dependent transport systems inner membrane component.
 0.993
U27_04529
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.981
U27_06556
Extracellular solute-binding protein family 1.
 
 0.979
U27_02941
Extracellular solute-binding protein family 1.
  
 0.972
U27_04765
Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.930
U27_06932
ABC transporter related; Belongs to the ABC transporter superfamily.
 
 0.929
U27_01940
ABC-type sugar/spermidine/putrescine/iron/ thiamine transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.925
U27_02366
SN-glycerol-3-phosphate ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.922
U27_01633
Binding-protein-dependent transport systems inner membrane component.
  0.918
U27_07096
ABC transporter related; Belongs to the ABC transporter superfamily.
 
 0.917
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.