STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_04703Cysteine desulfurase family protein. (129 aa)    
Predicted Functional Partners:
U27_00612
Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
 0.993
U27_04702
Cysteine desulfurase family protein.
     0.991
U27_03638
sufBD protein.
  
 
 0.908
U27_02387
Endonuclease/exonuclease/phosphatase.
    
   0.892
U27_03229
Endonuclease/exonuclease/phosphatase.
    
   0.892
U27_06170
Endonuclease/exonuclease/phosphatase family protein.
    
   0.892
U27_03637
ABC transporter, ATP-binding protein.
  
  
 0.859
U27_01904
NcpA protein.
  
 
 0.806
U27_02713
Cysteine desulfurase NifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
 
  
 0.712
selD
Hypothetical selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP.
 
  
 0.712
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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