STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_04904DNA methylase N-4/N-6 domain protein. (550 aa)    
Predicted Functional Partners:
U27_02476
Hypothetical protein.
 
  
 0.906
U27_01370
Restriction endonuclease.
 
  
 0.820
U27_01373
Site-specific DNA-methyltransferase (Adenine-specific).
  
     0.749
U27_02040
Type III restriction protein res subunit.
  
  
 0.674
U27_04903
Peptidase M20D family protein; Belongs to the peptidase M20A family.
       0.598
U27_00986
DNA methylase N-4/N-6 domain protein; Belongs to the N(4)/N(6)-methyltransferase family.
 
   
 0.578
U27_00492
Type III restriction-modification enzyme, R/helicase subunit.
  
     0.496
U27_00888
DNA methylase N-4/N-6 domain protein; Belongs to the N(4)/N(6)-methyltransferase family.
 
   
 0.469
U27_00470
Hypothetical protein.
 
   
 0.413
U27_01872
Hypothetical protein; Belongs to the N(4)/N(6)-methyltransferase family.
 
   
 0.405
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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