STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_04920Phosphoenolpyruvate carboxykinase. (654 aa)    
Predicted Functional Partners:
U27_01584
Pyruvate-flavodoxin oxidoreductase.
   
 
 0.961
U27_06545
porA1 protein.
  
 
 0.845
U27_01078
Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
 
 0.840
U27_00156
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine dip-binding domain protein.
   
 
 0.829
U27_02180
Pyruvate ferredoxin oxidoreductase, alpha subunit.
   
 
 0.829
U27_06547
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
   
 
 0.829
U27_06926
3-methyl-2-oxobutanoate dehydrogenase (Ferredoxin), alpha subunit.
   
 
 0.829
U27_00158
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family.
   
 
 0.816
U27_02046
Indolepyruvate oxidoreductase subunit IorB.
   
 
 0.816
U27_02178
Pyruvate ferredoxin oxidoreductase, gamma subunit.
   
 
 0.816
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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