STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_05016Hypothetical protein. (405 aa)    
Predicted Functional Partners:
U27_01575
Putative conserved membrane protein; Belongs to the UbiA prenyltransferase family.
    
 0.713
U27_05261
Dihydroorotate dehydrogenase family protein; Belongs to the dihydroorotate dehydrogenase family.
  
    0.673
U27_00757
Oxidoreductase FAD/NAD(P)-binding domain protein.
  
    0.672
U27_01904
NcpA protein.
  
 
 0.586
kdsB-2
3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
       0.572
U27_00978
Aldehyde dehydrogenase.
    
 0.560
U27_01736
1-pyrroline-5-carboxylate dehydrogenase.
    
 0.560
U27_02026
Acetaldehyde dehydrogenase.
    
 0.560
U27_03333
Succinate-semialdehyde dehydrogenase (NAD(P)(+)).
    
 0.560
U27_03334
Succinate-semialdehyde dehydrogenase (NAD(P)(+)).
    
 0.560
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.