STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_05779Formate dehydrogenase, beta subunit. (159 aa)    
Predicted Functional Partners:
U27_05824
Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.997
U27_05778
Aldehyde ferredoxin oxidoreductase.
 0.995
U27_06355
Putative tungsten-containing aldehyde:ferredoxin oxidoreductase.
 0.979
U27_06356
Tungsten-containing aldehyde ferredoxin oxidoreductase.
 0.979
U27_02398
Aldehyde ferredoxin oxidoreductase.
 0.978
U27_04426
Aldehyde ferredoxin oxidoreductase.
 0.975
U27_06499
Tungsten-containing aldehyde ferredoxin oxidoreductase, alpha chain.
 0.965
U27_01077
Aldehyde ferredoxin oxidoreductase.
  
 0.955
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.934
U27_03912
Putative formate dehydrogenase, alphasubunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.917
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.