STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_05919Amino acid or sugar ABC transport system, permease protein, putative; Belongs to the binding-protein-dependent transport system permease family. (330 aa)    
Predicted Functional Partners:
U27_05918
ABC transporter, ATP-binding protein.
 
  0.854
U27_05916
Hypothetical protein.
  0.780
U27_05917
Amino acid or sugar ABC transport system, permease protein, putative; Belongs to the binding-protein-dependent transport system permease family.
 
    
0.733
U27_05920
Aldo/keto reductase.
       0.714
U27_03043
ABC transporter related protein.
 
  0.694
U27_01063
ABC transporter related.
 
  0.691
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.680
U27_02432
Periplasmic binding protein/LacI transcriptional regulator.
 
  0.666
U27_05945
D-ribose ABC transporter, substrate-binding protein.
 
  0.663
U27_06553
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
  0.659
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.