STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_05921Hypothetical protein. (285 aa)    
Predicted Functional Partners:
U27_04644
Selenate reductase YgfK.
  
 
 0.825
U27_00601
Hypothetical protein.
 
 
 0.813
U27_05920
Aldo/keto reductase.
  
 
 0.792
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.761
U27_05886
Hypothetical protein.
  
 
 0.748
U27_06927
Conserved domain protein.
  
 
 0.748
U27_05436
propionyl-CoA carboxylase carboxyltransferase subunit.
  
 
 0.723
U27_01584
Pyruvate-flavodoxin oxidoreductase.
    
 0.722
U27_01012
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
  
 
 0.710
U27_04473
methylmalonyl-CoA mutase.
    
 0.696
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.