STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_06088Conserved repeat domain protein. (398 aa)    
Predicted Functional Partners:
U27_06089
ATPase associated with various cellular activities AAA_3.
 
  
 0.874
U27_06087
Predicted membrane-associated HD superfamily hydrolase.
       0.785
U27_05854
Hypothetical protein.
 
  
 0.670
U27_05856
ATPase, AAA family| putative Methanol dehydrogenase regulatory protein MoxR.
 
  
 0.663
U27_05039
Hypothetical protein ANT_09550.
 
  
 0.628
U27_00129
Hypothetical protein ANT_09550.
 
  
 0.607
U27_06400
Hypothetical protein.
  
  
 0.554
U27_05382
ATPase associated with various cellular activities AAA_3.
 
  
 0.552
U27_04234
ATPase associated with various cellular activities AAA_3.
 
  
 0.483
U27_01282
Hypothetical protein.
  
  
 0.460
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.