STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_06118Putative permease of ABC transporter; Belongs to the binding-protein-dependent transport system permease family. (332 aa)    
Predicted Functional Partners:
U27_06119
Monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.982
U27_06117
ABC transporter related protein.
  0.945
U27_04686
ABC transporter, substrate-binding protein.
 
  0.856
U27_01995
Hypothetical protein.
 
  0.821
U27_02454
Ribose/xylose/arabinose/galactoside ABC-type transport system protein.
 
  0.812
U27_04600
Periplasmic binding protein and sugar binding domain of the LacI.
  
  0.799
U27_02455
Sugar ABC transporter ATPase/substrate-binding protein.
 
  0.738
U27_06553
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
  0.735
U27_06254
Sugar ABC transporter, sugar-binding protein.
 
  0.711
U27_02432
Periplasmic binding protein/LacI transcriptional regulator.
 
  0.698
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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