STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_06170Endonuclease/exonuclease/phosphatase family protein. (303 aa)    
Predicted Functional Partners:
U27_02171
Hypothetical protein.
    
   0.892
U27_04702
Cysteine desulfurase family protein.
    
   0.892
U27_04703
Cysteine desulfurase family protein.
    
   0.892
U27_05669
Cysteine desulfurase / selenocysteine lyase.
    
   0.892
U27_02971
Hypothetical protein.
  
 
 0.681
U27_02972
Hypothetical protein.
  
 
 0.681
U27_03170
Phospholipase D/Transphosphatidylase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
  
 
 0.681
U27_03230
Phospholipase D/transphosphatidylase.
  
 
 0.681
U27_01882
Sporulation domain protein.
  
    0.661
U27_00427
Hypothetical protein.
  
  
  0.649
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.