STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_06172Hypothetical protein. (126 aa)    
Predicted Functional Partners:
U27_06175
ATP-NAD/AcoX kinase.
 
     0.810
U27_06177
Hypothetical protein.
 
     0.646
U27_06173
Pyruvate dehydrogenase E1 component subunit alpha.
 
     0.631
U27_06719
Hypothetical protein.
  
     0.621
U27_04968
Hypothetical protein.
  
     0.485
U27_06171
Acetoin operon expression regulatory protein.
       0.480
U27_01398
DEAD/DEAH box helicase-like protein.
  
     0.426
U27_06176
Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system.
 
     0.422
U27_05336
Serine/threonine kinase with two-component sensor domain.
  
     0.420
U27_05951
Hypothetical protein.
  
     0.417
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.