STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_06175ATP-NAD/AcoX kinase. (335 aa)    
Predicted Functional Partners:
U27_06177
Hypothetical protein.
 
     0.841
U27_06173
Pyruvate dehydrogenase E1 component subunit alpha.
 
  
 0.823
U27_06176
Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system.
 
  
 0.823
U27_06172
Hypothetical protein.
 
     0.810
U27_06174
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta.
 
  
 0.795
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
  0.596
U27_02450
Pyruvate dehydrogenase.
 
  
 0.583
U27_05442
Alkaline phosphatase; Belongs to the alkaline phosphatase family.
     
  0.499
U27_06171
Acetoin operon expression regulatory protein.
 
   
 0.475
U27_01485
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
    
  0.462
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.