STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_06224Putative ABC-type sugar transporter, ATPase component. (496 aa)    
Predicted Functional Partners:
U27_06223
Ribose transport system permease protein, RbsC; Belongs to the binding-protein-dependent transport system permease family.
  0.875
U27_06222
D-ribose-binding periplasmic protein.
  
  0.746
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.682
U27_06212
Monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
  0.660
U27_06225
Periplasmic binding protein/LacI transcriptional regulator.
  
 
  0.660
U27_00871
Monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
  0.658
U27_00705
Monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
  0.645
U27_00370
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.642
U27_00969
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  0.642
U27_02431
Sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
  0.642
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.