STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_06242Glutamine synthetase. (440 aa)    
Predicted Functional Partners:
U27_00258
Transcriptional regulator.
  
 
 0.966
U27_06240
Glutamate synthase (Ferredoxin).
  
 
 0.966
U27_02941
Extracellular solute-binding protein family 1.
    
 
 0.913
U27_06556
Extracellular solute-binding protein family 1.
    
 
 0.913
U27_00484
Glutamine amidotransferase class-I domain protein.
  
 
 0.873
U27_00840
Peptidase C26.
  
 
 0.873
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
 
 0.860
leuS
leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.854
U27_05570
Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains.
 
 
 0.852
U27_00602
Hypothetical protein.
    
 0.847
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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