STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_06813Protein containing DUF433. (104 aa)    
Predicted Functional Partners:
U27_06814
Hypothetical protein.
     
 0.799
U27_06682
Hypothetical protein.
 
   
 0.784
U27_03722
Hypothetical protein.
  
     0.773
U27_06681
Hypothetical protein.
  
     0.767
U27_06966
Gll2956 protein.
  
     0.764
U27_00393
Phosphate acetyltransferase.
  
     0.762
U27_03721
Hypothetical protein.
 
   
 0.723
U27_06965
Hypothetical protein.
 
   
 0.717
U27_02519
Hypothetical protein.
  
     0.686
U27_05452
YcfA-like protein.
  
     0.668
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.