STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_06868Cobalt transport protein. (81 aa)    
Predicted Functional Partners:
U27_06869
ABC transporter related protein.
 
 0.998
U27_02641
Cobalamin/vitamin B12 biosynthesis CbiM protein.
  
 0.986
U27_02643
Cobalt ABC transporter ATPase subunit.
 
 0.982
U27_00474
Cobalt import ABC superfamily ATP binding cassette transporter, ABC protein.
  
 0.980
U27_01280
ABC transporter related protein.
  
 0.980
U27_03377
Oligopeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.980
U27_05210
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
  
 0.980
U27_02789
BioY protein.
  
 0.964
U27_06867
Cobalt ABC transporter, inner membrane subunit CbiQ.
 
     0.921
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.717
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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