STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB84861.1Catechol 2,3-dioxygenase. (138 aa)    
Predicted Functional Partners:
SEB84797.1
Transcriptional regulator, AraC family.
 
     0.939
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
    
 0.844
SEF07474.1
Urea carboxylase.
    
 0.710
SEF08079.1
ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific).
  
 
 0.706
SED94878.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 
 0.689
trpB
Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
  0.679
argA
N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily.
    
  0.653
SEC65278.1
Rhodanese-related sulfurtransferase.
   
 
  0.636
SEE91079.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
  
 
 0.609
SEF03108.1
FAD/FMN-containing dehydrogenase.
  
  
  0.605
Your Current Organism:
Burkholderia sp. WP9
NCBI taxonomy Id: 1500263
Other names: B. sp. WP9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.