STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF06330.1Arginine:pyruvate transaminase. (408 aa)    
Predicted Functional Partners:
SEE01459.1
Chorismate mutase /prephenate dehydratase.
 
 
 0.850
SED70113.1
Glutamate synthase (NADH) large subunit.
    
 0.840
SED16174.1
Para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase.
   
 0.782
SEB87149.1
Dihydrolipoamide dehydrogenase.
  
 0.756
SEC03720.1
Aspartate kinase; Belongs to the aspartokinase family.
  
 0.747
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.743
SED56133.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
 0.722
SEE69751.1
L-proline dehydrogenase.
   
 
 0.722
SED34524.1
Indolepyruvate ferredoxin oxidoreductase.
    
 0.719
SED65919.1
Indolepyruvate ferredoxin oxidoreductase.
    
 0.719
Your Current Organism:
Burkholderia sp. WP9
NCBI taxonomy Id: 1500263
Other names: B. sp. WP9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.