STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN36345.1S-adenosylmethionine uptake transporter. (297 aa)    
Predicted Functional Partners:
SHN36338.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
       0.796
SHN36350.1
Phenylpropionate dioxygenase, large terminal subunit.
 
     0.779
SHN36360.1
Farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
    
  0.615
folE2
GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate.
  
    0.606
SHN36331.1
Nucleotide-binding universal stress protein, UspA family.
       0.570
xseB
Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
  
    0.515
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
       0.493
SHM98376.1
EpsI family protein.
  
     0.451
SHN11473.1
N-acetylmuramoyl-L-alanine amidase.
   
    0.431
SHM42721.1
EamA-like transporter family protein.
  
     0.415
Your Current Organism:
Rhizobacter sp. OV335
NCBI taxonomy Id: 1500264
Other names: R. sp. OV335
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.