STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN40044.1Hypothetical protein. (495 aa)    
Predicted Functional Partners:
SHN40047.1
Hypothetical protein.
       0.801
SHN40011.1
Hypothetical protein.
       0.797
SHN40024.1
Hypothetical protein.
       0.773
SHN40027.1
Hypothetical protein.
       0.773
SHN40051.1
Hypothetical protein.
       0.773
SHN40021.1
Hypothetical protein.
       0.768
SHN40005.1
Hypothetical protein.
       0.762
SHN40009.1
Hypothetical protein.
       0.762
SHN40001.1
Hypothetical protein.
       0.761
SHN40055.1
Hypothetical protein.
       0.709
Your Current Organism:
Rhizobacter sp. OV335
NCBI taxonomy Id: 1500264
Other names: R. sp. OV335
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.