STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT08258.1Thioredoxin. (103 aa)    
Predicted Functional Partners:
SFT08271.1
Toprim domain protein.
 
    0.849
SFS31251.1
Hypothetical protein.
  
  
 0.755
SFS84933.1
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II.
    
 0.739
SFS83676.1
Thioredoxin reductase (NADPH).
 
 0.718
SFS45792.1
PBS lyase HEAT-like repeat-containing protein.
  
    0.700
SFT11427.1
Chaperonin GroEL.
   
 
 0.694
SFT15914.1
Uncharacterized protein YuzB, UPF0349 family.
  
     0.692
SFT14569.1
Protein of unknown function.
  
     0.675
SFT16419.1
Predicted ATPase.
  
 0.672
SFS53511.1
Small GTP-binding protein domain-containing protein.
    
 
 0.670
Your Current Organism:
Lysinibacillus sp. SG55
NCBI taxonomy Id: 1500270
Other names: L. sp. SG55
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.