STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG66373.1SPFH domain / Band 7 family protein. (503 aa)    
Predicted Functional Partners:
SHE42397.1
Cell division protease FtsH.
   
 0.947
ftsH
Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.947
SHG23287.1
Membrane associated serine protease, rhomboid family.
    
 0.748
SHG31992.1
Membrane associated serine protease, rhomboid family.
    
 0.748
SHG78362.1
Hypothetical protein.
    
 0.748
SHG88637.1
Membrane associated serine protease, rhomboid family.
    
 0.748
SHG03890.1
Uridine kinase.
    
  0.744
SHG47255.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
    
  0.742
SHE77544.1
Flotillin.
  
  
 0.730
SHF91286.1
Hypothetical protein.
  
  
 0.584
Your Current Organism:
Chryseobacterium sp. OV279
NCBI taxonomy Id: 1500285
Other names: C. sp. OV279
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.