STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000799335_01510Unannotated protein. (135 aa)    
Predicted Functional Partners:
GCA_000799335_03126
Unannotated protein.
 
      0.566
GCA_000799335_01511
Unannotated protein.
       0.551
GCA_000799335_00975
Unannotated protein.
  
 
 0.538
GCA_000799335_00621
Unannotated protein.
    
  0.534
GCA_000799335_03579
Unannotated protein.
    
  0.518
GCA_000799335_01509
Unannotated protein.
       0.493
GCA_000799335_01543
Unannotated protein.
  
 
  0.489
GCA_000799335_04676
Unannotated protein.
    
 0.482
GCA_000799335_01664
Unannotated protein.
    
  0.463
GCA_000799335_01778
Unannotated protein.
   
    0.416
Your Current Organism:
Chryseobacterium sp. YR485
NCBI taxonomy Id: 1500294
Other names: C. sp. YR485
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.