STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000799335_03224Unannotated protein. (255 aa)    
Predicted Functional Partners:
GCA_000799335_03223
Unannotated protein.
       0.679
GCA_000799335_03346
Unannotated protein.
     
 0.637
GCA_000799335_03225
Unannotated protein.
 
     0.566
GCA_000799335_00207
Unannotated protein.
  
 
 
 0.551
GCA_000799335_00801
Unannotated protein.
    
 0.536
GCA_000799335_01493
Unannotated protein.
    
 0.536
GCA_000799335_03255
Unannotated protein.
  
   
 0.474
GCA_000799335_04578
Unannotated protein.
    
 
 0.473
GCA_000799335_03496
Unannotated protein.
    
 
 0.455
GCA_000799335_03498
Unannotated protein.
  
    0.441
Your Current Organism:
Chryseobacterium sp. YR485
NCBI taxonomy Id: 1500294
Other names: C. sp. YR485
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.