STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG79831.1ABC transporter ATP-binding protein. (255 aa)    
Predicted Functional Partners:
OJG79832.1
Hypothetical protein.
 0.981
OJG82948.1
Hypothetical protein.
 0.865
OJG81718.1
ABC transporter ATP-binding protein/permease.
 
0.797
OJG83938.1
Putative ABC transporter, permease protein (putative).
 
 0.793
OJG83127.1
Efflux ABC transporter permease.
 
 0.793
OJG82946.1
Hypothetical protein.
 
0.708
OJG81723.1
ABC-type antimicrobial peptide transport system, permease component.
 
 
 0.705
OJG80887.1
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
 
 
 0.689
OJG78102.1
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
 
 
 0.689
OJG82663.1
Hypothetical protein.
  
 0.686
Your Current Organism:
Enterococcus ratti
NCBI taxonomy Id: 150033
Other names: ATCC 700914, CCUG 43228, CIP 107173, DSM 15687, E. ratti, Enterococcus ratti Teixeira et al. 2001, Enterococcus rattii, NBRC 100698, NCIMB 13635, strain DS 2705-87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.