STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG78409.1Hypothetical protein. (71 aa)    
Predicted Functional Partners:
OJG78410.1
Hypothetical protein.
       0.747
OJG78411.1
Hypothetical protein.
       0.741
OJG78412.1
Hypothetical protein.
       0.741
OJG78408.1
Hypothetical protein.
       0.698
OJG78413.1
Type IV secretion system protein.
       0.629
OJG78407.1
Hypothetical protein.
       0.580
OJG78414.1
Hypothetical protein.
       0.534
Your Current Organism:
Enterococcus ratti
NCBI taxonomy Id: 150033
Other names: ATCC 700914, CCUG 43228, CIP 107173, DSM 15687, E. ratti, Enterococcus ratti Teixeira et al. 2001, Enterococcus rattii, NBRC 100698, NCIMB 13635, strain DS 2705-87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.