STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG83175.1Hypothetical protein. (268 aa)    
Predicted Functional Partners:
OJG83176.1
Hypothetical protein.
     0.994
OJG80271.1
Hypothetical protein.
 
     0.976
OJG83088.1
RNA polymerase sigma-54 factor.
 
 
 
 0.931
OJG80270.1
Hypothetical protein.
 
     0.890
OJG83180.1
PTS system transporter subunit IIC.
 
 
 0.889
OJG83178.1
Hypothetical protein.
 
    0.816
OJG83345.1
Lichenan operon transcriptional antiterminator.
 
  
 0.757
OJG83179.1
PTS system mannose/fructose/sorbose transporter subunit IID.
 
  
 0.753
OJG83341.1
PTS system transporter subunit IIB.
 
  
 0.724
OJG82780.1
PTS system, Fru family, IIC component.
    
 0.724
Your Current Organism:
Enterococcus ratti
NCBI taxonomy Id: 150033
Other names: ATCC 700914, CCUG 43228, CIP 107173, DSM 15687, E. ratti, Enterococcus ratti Teixeira et al. 2001, Enterococcus rattii, NBRC 100698, NCIMB 13635, strain DS 2705-87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.