STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG07269.1Hypothetical protein. (110 aa)    
Predicted Functional Partners:
SMG07275.1
Probable F420-dependent oxidoreductase, Rv1855c family.
       0.556
SMG07241.1
Energy-coupling factor transport system substrate-specific component.
       0.446
SMG07305.1
Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family.
       0.441
SMG07314.1
Maltooligosyl trehalose synthase.
       0.435
SMG07343.1
Maltooligosyl trehalose hydrolase.
       0.435
SMG07233.1
Uridine kinase.
       0.426
SMG07238.1
Energy-coupling factor transport system permease protein.
       0.413
SMG07239.1
Energy-coupling factor transport system ATP-binding protein.
       0.413
Your Current Organism:
Agreia pratensis
NCBI taxonomy Id: 150121
Other names: A. pratensis, Agreia pratensis (Behrendt et al. 2002) Schumann et al. 2003, DSM 14246, JCM 12145, LMG 21000, LMG:21000, NBRC 103054, Subtercola pratensis, Subtercola pratensis Behrendt et al. 2002, Subtercola sp. P229/10, VKM Ac-2510, strain P 229/10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.