Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMG12235.1 | SMG12861.1 | SAMN06296010_0361 | SAMN06296010_0419 | Mannose-6-phosphate isomerase, type 1. | Phosphomannomutase. | 0.922 |
SMG12235.1 | SMG15745.1 | SAMN06296010_0361 | SAMN06296010_0636 | Mannose-6-phosphate isomerase, type 1. | Hypothetical protein. | 0.892 |
SMG12235.1 | SMG26372.1 | SAMN06296010_0361 | SAMN06296010_1321 | Mannose-6-phosphate isomerase, type 1. | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. | 0.855 |
SMG12235.1 | SMG26378.1 | SAMN06296010_0361 | SAMN06296010_1322 | Mannose-6-phosphate isomerase, type 1. | PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family. | 0.884 |
SMG12235.1 | SMG37922.1 | SAMN06296010_0361 | SAMN06296010_2347 | Mannose-6-phosphate isomerase, type 1. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.847 |
SMG12235.1 | glmS | SAMN06296010_0361 | SAMN06296010_1757 | Mannose-6-phosphate isomerase, type 1. | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.896 |
SMG12235.1 | mtlD | SAMN06296010_0361 | SAMN06296010_1736 | Mannose-6-phosphate isomerase, type 1. | D-mannitol 1-phosphate 5-dehydrogenase. | 0.897 |
SMG12235.1 | nagB | SAMN06296010_0361 | SAMN06296010_3239 | Mannose-6-phosphate isomerase, type 1. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | 0.895 |
SMG12235.1 | pfkA | SAMN06296010_0361 | SAMN06296010_2375 | Mannose-6-phosphate isomerase, type 1. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. | 0.896 |
SMG12235.1 | pgi | SAMN06296010_0361 | SAMN06296010_0513 | Mannose-6-phosphate isomerase, type 1. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.931 |
SMG12861.1 | SMG12235.1 | SAMN06296010_0419 | SAMN06296010_0361 | Phosphomannomutase. | Mannose-6-phosphate isomerase, type 1. | 0.922 |
SMG12861.1 | SMG15745.1 | SAMN06296010_0419 | SAMN06296010_0636 | Phosphomannomutase. | Hypothetical protein. | 0.882 |
SMG12861.1 | SMG37922.1 | SAMN06296010_0419 | SAMN06296010_2347 | Phosphomannomutase. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.445 |
SMG12861.1 | glmS | SAMN06296010_0419 | SAMN06296010_1757 | Phosphomannomutase. | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.561 |
SMG12861.1 | pfkA | SAMN06296010_0419 | SAMN06296010_2375 | Phosphomannomutase. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. | 0.525 |
SMG12861.1 | pgi | SAMN06296010_0419 | SAMN06296010_0513 | Phosphomannomutase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.749 |
SMG15745.1 | SMG12235.1 | SAMN06296010_0636 | SAMN06296010_0361 | Hypothetical protein. | Mannose-6-phosphate isomerase, type 1. | 0.892 |
SMG15745.1 | SMG12861.1 | SAMN06296010_0636 | SAMN06296010_0419 | Hypothetical protein. | Phosphomannomutase. | 0.882 |
SMG15745.1 | pfkA | SAMN06296010_0636 | SAMN06296010_2375 | Hypothetical protein. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. | 0.450 |
SMG15745.1 | pgi | SAMN06296010_0636 | SAMN06296010_0513 | Hypothetical protein. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.511 |
page 1 of 4