STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG17666.1Hypothetical protein. (234 aa)    
Predicted Functional Partners:
SMG17656.1
Uncharacterized protein YcnI.
 
  
 0.946
SMG44360.1
Putative copper resistance protein D.
 
  
 0.824
SMG43801.1
Putative copper resistance protein D.
 
  
 0.764
SMG23462.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
   0.700
SMG31290.1
Integral membrane protein.
   
    0.614
SMG30025.1
Dye decolorizing peroxidase.
  
    0.607
SMG42066.1
Deferrochelatase/peroxidase EfeB; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
  
    0.607
SMG36437.1
Hypothetical protein.
  
     0.598
SMG49486.1
Hypothetical protein; Manually curated.
  
     0.589
SMG24915.1
Hypothetical protein.
  
     0.582
Your Current Organism:
Agreia pratensis
NCBI taxonomy Id: 150121
Other names: A. pratensis, Agreia pratensis (Behrendt et al. 2002) Schumann et al. 2003, DSM 14246, JCM 12145, LMG 21000, LMG:21000, NBRC 103054, Subtercola pratensis, Subtercola pratensis Behrendt et al. 2002, Subtercola sp. P229/10, VKM Ac-2510, strain P 229/10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.