STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG18735.1Predicted ATPase. (953 aa)    
Predicted Functional Partners:
SMG18731.1
Regulatory protein, luxR family.
 
  
 
0.734
SMG18740.1
Pimeloyl-ACP methyl ester carboxylesterase.
 
     0.640
SMG26325.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
  
 
 0.567
SMG45630.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.567
SMG18818.1
Pimeloyl-ACP methyl ester carboxylesterase.
 
     0.530
SMG11636.1
Signal transduction histidine kinase.
   
  0.529
SMG12755.1
Hypothetical protein.
   
  0.529
SMG12760.1
Signal transduction histidine kinase.
   
  0.529
SMG13944.1
Hypothetical protein.
   
  0.529
SMG18600.1
Signal transduction histidine kinase.
   
  0.529
Your Current Organism:
Agreia pratensis
NCBI taxonomy Id: 150121
Other names: A. pratensis, Agreia pratensis (Behrendt et al. 2002) Schumann et al. 2003, DSM 14246, JCM 12145, LMG 21000, LMG:21000, NBRC 103054, Subtercola pratensis, Subtercola pratensis Behrendt et al. 2002, Subtercola sp. P229/10, VKM Ac-2510, strain P 229/10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.