STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG19362.13-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase. (311 aa)    
Predicted Functional Partners:
SMG13044.1
Exodeoxyribonuclease-3.
    
 0.670
SMG16237.1
Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family.
    
 0.670
SMG27968.1
Exodeoxyribonuclease-3.
    
 0.670
SMG19390.1
Hypothetical protein.
       0.541
SMG49577.1
MerR family regulatory protein.
  
     0.524
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 
 0.501
SMG17694.1
Hypothetical protein.
  
  
  0.493
SMG30086.1
ATP dependent helicase, Lhr family.
  
     0.480
SMG10853.1
L-ascorbate metabolism protein UlaG, beta-lactamase superfamily.
  
     0.475
SMG49688.1
ATP-dependent DNA ligase.
 
  
 0.461
Your Current Organism:
Agreia pratensis
NCBI taxonomy Id: 150121
Other names: A. pratensis, Agreia pratensis (Behrendt et al. 2002) Schumann et al. 2003, DSM 14246, JCM 12145, LMG 21000, LMG:21000, NBRC 103054, Subtercola pratensis, Subtercola pratensis Behrendt et al. 2002, Subtercola sp. P229/10, VKM Ac-2510, strain P 229/10
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.