STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG24524.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (445 aa)    
Predicted Functional Partners:
SMG24517.1
Multiple sugar transport system permease protein.
 
  0.978
SMG24520.1
Multiple sugar transport system permease protein.
  0.970
SMG26931.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.946
SMG16318.1
Multiple sugar transport system permease protein.
 
  0.927
SMG26936.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.927
SMG16313.1
Multiple sugar transport system permease protein.
 
  0.925
SMG07943.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.920
SMG07947.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.917
SMG14426.1
Multiple sugar transport system permease protein.
 
  0.910
SMG14431.1
Multiple sugar transport system permease protein.
 
  0.909
Your Current Organism:
Agreia pratensis
NCBI taxonomy Id: 150121
Other names: A. pratensis, Agreia pratensis (Behrendt et al. 2002) Schumann et al. 2003, DSM 14246, JCM 12145, LMG 21000, LMG:21000, NBRC 103054, Subtercola pratensis, Subtercola pratensis Behrendt et al. 2002, Subtercola sp. P229/10, VKM Ac-2510, strain P 229/10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.