STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG24676.1Phospholipase C. (750 aa)    
Predicted Functional Partners:
SMG19911.1
Myo-inositol-1(or 4)-monophosphatase/deoxyribonuclease-2.
  
 
  0.781
SMG29496.1
Cardiolipin synthetase 2; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
     
 0.723
SMG40899.1
Cardiolipin synthetase 2; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
     
 0.723
SMG17909.1
Histidine phosphatase superfamily (branch 2).
  
     0.641
SMG45333.1
Choline dehydrogenase.
  
  
  0.450
SMG24799.1
Antitoxin YefM; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.446
SMG24812.1
Toxin YoeB.
       0.446
SMG24645.1
Subtilase family protein.
  
     0.441
SMG45194.1
Pyridine nucleotide-disulphide oxidoreductase.
  
     0.432
SMG24118.1
Predicted SnoaL-like aldol condensation-catalyzing enzyme.
  
     0.410
Your Current Organism:
Agreia pratensis
NCBI taxonomy Id: 150121
Other names: A. pratensis, Agreia pratensis (Behrendt et al. 2002) Schumann et al. 2003, DSM 14246, JCM 12145, LMG 21000, LMG:21000, NBRC 103054, Subtercola pratensis, Subtercola pratensis Behrendt et al. 2002, Subtercola sp. P229/10, VKM Ac-2510, strain P 229/10
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