STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG26664.1alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family. (756 aa)    
Predicted Functional Partners:
SMG26661.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
     0.815
SMG18995.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
   
 0.665
SMG49909.1
Beta-glucosidase.
 
  
  0.664
SMG26654.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
     0.660
SMG38624.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
    
  0.659
SMG26646.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
 
     0.637
SMG41368.1
Amylosucrase.
    
  0.627
SMG37050.1
Glycosidase.
    
  0.624
SMG45068.1
Beta-fructofuranosidase; Belongs to the glycosyl hydrolase 32 family.
     
 0.601
SMG37300.1
Aconitase.
    
   0.600
Your Current Organism:
Agreia pratensis
NCBI taxonomy Id: 150121
Other names: A. pratensis, Agreia pratensis (Behrendt et al. 2002) Schumann et al. 2003, DSM 14246, JCM 12145, LMG 21000, LMG:21000, NBRC 103054, Subtercola pratensis, Subtercola pratensis Behrendt et al. 2002, Subtercola sp. P229/10, VKM Ac-2510, strain P 229/10
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