Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMG07233.1 | SMG27411.1 | SAMN06296010_0030 | SAMN06296010_1418 | Uridine kinase. | Superfamily II DNA or RNA helicase, SNF2 family. | 0.719 |
SMG07233.1 | SMG29415.1 | SAMN06296010_0030 | SAMN06296010_1574 | Uridine kinase. | Conserved hypothetical protein. | 0.765 |
SMG07233.1 | SMG36586.1 | SAMN06296010_0030 | SAMN06296010_2165 | Uridine kinase. | Helicase conserved C-terminal domain-containing protein. | 0.719 |
SMG07451.1 | SMG29415.1 | SAMN06296010_0048 | SAMN06296010_1574 | TIGR03086 family protein. | Conserved hypothetical protein. | 0.489 |
SMG07451.1 | mca | SAMN06296010_0048 | SAMN06296010_2650 | TIGR03086 family protein. | Mycothiol S-conjugate amidase; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.425 |
SMG27411.1 | SMG07233.1 | SAMN06296010_1418 | SAMN06296010_0030 | Superfamily II DNA or RNA helicase, SNF2 family. | Uridine kinase. | 0.719 |
SMG27411.1 | SMG29415.1 | SAMN06296010_1418 | SAMN06296010_1574 | Superfamily II DNA or RNA helicase, SNF2 family. | Conserved hypothetical protein. | 0.810 |
SMG27411.1 | SMG36416.1 | SAMN06296010_1418 | SAMN06296010_2148 | Superfamily II DNA or RNA helicase, SNF2 family. | Hypothetical protein. | 0.719 |
SMG29415.1 | SMG07233.1 | SAMN06296010_1574 | SAMN06296010_0030 | Conserved hypothetical protein. | Uridine kinase. | 0.765 |
SMG29415.1 | SMG07451.1 | SAMN06296010_1574 | SAMN06296010_0048 | Conserved hypothetical protein. | TIGR03086 family protein. | 0.489 |
SMG29415.1 | SMG27411.1 | SAMN06296010_1574 | SAMN06296010_1418 | Conserved hypothetical protein. | Superfamily II DNA or RNA helicase, SNF2 family. | 0.810 |
SMG29415.1 | SMG29418.1 | SAMN06296010_1574 | SAMN06296010_1575 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.960 |
SMG29415.1 | SMG29424.1 | SAMN06296010_1574 | SAMN06296010_1576 | Conserved hypothetical protein. | Probable phosphomutase, MSMEG_4193 family. | 0.943 |
SMG29415.1 | SMG36416.1 | SAMN06296010_1574 | SAMN06296010_2148 | Conserved hypothetical protein. | Hypothetical protein. | 0.765 |
SMG29415.1 | SMG36586.1 | SAMN06296010_1574 | SAMN06296010_2165 | Conserved hypothetical protein. | Helicase conserved C-terminal domain-containing protein. | 0.810 |
SMG29415.1 | mca | SAMN06296010_1574 | SAMN06296010_2650 | Conserved hypothetical protein. | Mycothiol S-conjugate amidase; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.486 |
SMG29415.1 | mshD | SAMN06296010_1574 | SAMN06296010_1835 | Conserved hypothetical protein. | Mycothiol synthase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.486 |
SMG29415.1 | serS | SAMN06296010_1574 | SAMN06296010_0836 | Conserved hypothetical protein. | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.755 |
SMG29418.1 | SMG29415.1 | SAMN06296010_1575 | SAMN06296010_1574 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.960 |
SMG29418.1 | SMG29424.1 | SAMN06296010_1575 | SAMN06296010_1576 | Conserved hypothetical protein. | Probable phosphomutase, MSMEG_4193 family. | 0.942 |
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