STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG36358.1Hypothetical protein. (339 aa)    
Predicted Functional Partners:
SMG36351.1
Hypothetical protein.
       0.642
SMG36365.1
Hypothetical protein.
       0.615
SMG36372.1
Hypothetical protein.
       0.615
SMG36346.1
Protein N-acetyltransferase, RimJ/RimL family.
       0.536
SMG36416.1
Hypothetical protein.
       0.528
SMG45752.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
   0.500
SMG28981.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
   0.465
SMG36074.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
   0.465
SMG46652.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family; Manually curated.
    
   0.465
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
       0.419
Your Current Organism:
Agreia pratensis
NCBI taxonomy Id: 150121
Other names: A. pratensis, Agreia pratensis (Behrendt et al. 2002) Schumann et al. 2003, DSM 14246, JCM 12145, LMG 21000, LMG:21000, NBRC 103054, Subtercola pratensis, Subtercola pratensis Behrendt et al. 2002, Subtercola sp. P229/10, VKM Ac-2510, strain P 229/10
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